4O7Q Crystal Structure of the F27G AIM2 Pyrin Domain Mutant and Similarities of its Self-association to DED/DED Interactions date
authors Lu, A., Kabaleeswaran, V., Wu, H.
compound source
symmetry
R_factor
R_Free 0.2378
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.82
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal Structure of the F27G AIM2 PYD Mutant and Similarities of Its Self-Association to DED/DED Interactions., Lu A, Kabaleeswaran V, Fu T, Magupalli VG, Wu H, J Mol Biol. 2014 Jan 7. pii: S0022-2836(13)00816-4. doi:, 10.1016/j.jmb.2013.12.029. PMID:24406744
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (4o7q.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 4O7Q
  • Structure Factors (400 Kb)
  • Retrieve 4O7Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4O7Q from S2C, [Save to disk]
  • Re-refined 4o7q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4O7Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4O7Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4O7Q, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o7q_A] [4o7q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4O7Q: [PYRIN ] by SMART
  • Other resources with information on 4O7Q
  • Community annotation for 4O7Q at PDBWiki (http://pdbwiki.org)

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