4O88 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, SO4 enzyme
Primary referenceStructure, mechanism, and specificity of a eukaryal tRNA restriction enzyme involved in self-nonself discrimination., Chakravarty AK, Smith P, Jalan R, Shuman S, Cell Rep. 2014 Apr 24;7(2):339-47. doi: 10.1016/j.celrep.2014.03.034. Epub 2014, Apr 13. PMID:24726365
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (216 Kb) [Save to disk]
  • Biological Unit Coordinates (4o88.pdb1.gz) 210 Kb
  • Biological Unit Coordinates (4o88.pdb2.gz) 417 Kb
  • LPC: Ligand-Protein Contacts for 4O88
  • CSU: Contacts of Structural Units for 4O88
  • Structure Factors (1562 Kb)
  • Retrieve 4O88 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4O88 from S2C, [Save to disk]
  • Re-refined 4o88 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4O88 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o88] [4o88_A] [4o88_B]
  • SWISS-PROT database:

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