4O92 Crystal structure of a Glutathione S-transferase from Pichia kudriavzevii (Issatchenkia orientalis), target EFI-501747 date 2013-12-31
authors Kim, J., Toro, R., Bhosle, R., Obaidi, N.F.Al., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Glenn, A.S., Chowdhury, S., Evans, B., Stead, M., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Attonito, J.D., Gerlt, J.A., Almo, S.C., EFI, Enzyme.Function.Initiative.
compound source
symmetry
R_factor
R_Free 0.25807
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.51
ligand MSE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (4o92.pdb1.gz) 32 Kb
  • Biological Unit Coordinates (4o92.pdb2.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 4O92
  • CSU: Contacts of Structural Units for 4O92
  • Structure Factors (154 Kb)
  • Retrieve 4O92 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4O92 from S2C, [Save to disk]
  • Re-refined 4o92 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4O92 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4O92
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4O92, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o92] [4o92_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4O92
  • Community annotation for 4O92 at PDBWiki (http://pdbwiki.org)

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