4O9V date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NT4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-guided discovery of 1,3,5 tri-substituted benzenes as potent and selective matriptase inhibitors exhibiting in vivo antitumor efficacy., Goswami R, Mukherjee S, Ghadiyaram C, Wohlfahrt G, Sistla RK, Nagaraj J, Satyam LK, Subbarao K, Palakurthy RK, Gopinath S, Krishnamurthy NR, Ikonen T, Moilanen A, Subramanya HS, Kallio P, Ramachandra M, Bioorg Med Chem. 2014 Jun 15;22(12):3187-203. doi: 10.1016/j.bmc.2014.04.013., Epub 2014 Apr 18. PMID:24794746
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (4o9v.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 4O9V
  • CSU: Contacts of Structural Units for 4O9V
  • Structure Factors (370 Kb)
  • Retrieve 4O9V in mmCIF format [Save to disk]
  • Re-refined 4o9v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4O9V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o9v] [4o9v_A] [4o9v_B]
  • SWISS-PROT database:
  • Domain found in 4O9V: [Tryp_SPc ] by SMART

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