4OKX Crystal structure of W741L-AR-LBD bound with co-regulator peptide date
authors Liu, J.S., Hsu, C.L., Wu, W.G.
compound source
symmetry
R_factor
R_Free 0.24769
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand 198, SO4 enzyme
Primary referenceIdentification of a new androgen receptor (AR) co-regulator BUD31 and related peptides to suppress wild-type and mutated AR-mediated prostate cancer growth via peptide screening and X-ray structure analysis., Hsu CL, Liu JS, Wu PL, Guan HH, Chen YL, Lin AC, Ting HJ, Pang ST, Yeh SD, Ma WL, Chen CJ, Wu WG, Chang C, Mol Oncol. 2014 Jun 24. pii: S1574-7891(14)00133-1. doi:, 10.1016/j.molonc.2014.06.009. PMID:25091737
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (4okx.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 4OKX
  • CSU: Contacts of Structural Units for 4OKX
  • Structure Factors (280 Kb)
  • Retrieve 4OKX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OKX from S2C, [Save to disk]
  • Re-refined 4okx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4OKX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4OKX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OKX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4okx_B] [4okx] [4okx_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4OKX: [HOLI ] by SMART
    • Other resources with information on 4OKX
  • Community annotation for 4OKX at PDBWiki (http://pdbwiki.org)

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