4OL0 Crystal structure of transportin-SR2, a karyopherin involved in human disease, in complex with Ran date 2014-01-23
authors Tsirkone, V.G., Strelkov, S.V.
compound source
symmetry
R_factor
R_Free 0.2757
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.90
ligand GTP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • intracellular transport of v...

  • B


    Primary referenceStructure of transportin SR2, a karyopherin involved in human disease, in complex with Ran., Tsirkone VG, Beutels KG, Demeulemeester J, Debyser Z, Christ F, Strelkov SV, Acta Crystallogr F Struct Biol Commun. 2014 Jun;70(Pt 6):723-9. doi:, 10.1107/S2053230X14009492. Epub 2014 May 24. PMID:24915079
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (364 Kb) [Save to disk]
  • Biological Unit Coordinates (4ol0.pdb1.gz) 359 Kb
  • LPC: Ligand-Protein Contacts for 4OL0
  • CSU: Contacts of Structural Units for 4OL0
  • Structure Factors (1481 Kb)
  • Retrieve 4OL0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OL0 from S2C, [Save to disk]
  • Re-refined 4ol0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4OL0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4OL0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OL0, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ol0] [4ol0_B] [4ol0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4OL0: [RAN ] by SMART
  • Other resources with information on 4OL0
  • Community annotation for 4OL0 at PDBWiki (http://pdbwiki.org)

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