4OQ3 Tetra-substituted imidazoles as a new class of inhibitors of the p53-MDM2 interaction date
authors Kallen, J.
compound source
symmetry
R_factor
R_Free 0.2243
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand 2V8 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceTetra-substituted imidazoles as a new class of inhibitors of the p53-MDM2 interaction., Vaupel A, Bold G, De Pover A, Stachyra-Valat T, Hergovich-Lisztwan J, Kallen J, Masuya K, Furet P, Bioorg Med Chem Lett. 2014 May 1;24(9):2110-4. doi: 10.1016/j.bmcl.2014.03.039., Epub 2014 Mar 22. PMID:24704029
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (4oq3.pdb1.gz) 18 Kb
  • Biological Unit Coordinates (4oq3.pdb2.gz) 18 Kb
  • Biological Unit Coordinates (4oq3.pdb3.gz) 18 Kb
  • Biological Unit Coordinates (4oq3.pdb4.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 4OQ3
  • CSU: Contacts of Structural Units for 4OQ3
  • Structure Factors (314 Kb)
  • Retrieve 4OQ3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OQ3 from S2C, [Save to disk]
  • Re-refined 4oq3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4OQ3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4OQ3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OQ3, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4oq3_D] [4oq3_A] [4oq3_C] [4oq3_B] [4oq3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4OQ3
  • Community annotation for 4OQ3 at PDBWiki (http://pdbwiki.org)

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