4OVN Voltage-gated Sodium Channel 1.5 (Nav1.5) C-terminal domain in complex with Calmodulin poised for activation date
authors Gabelli, S.B., Bianchet, M.A., Boto, A., Jakoncic, J., Tomaselli, G.F., Amzel, L.M.
compound source
symmetry
R_factor
R_Free 0.2820
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
ligand MG, MSE, PO4, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, E, B, C, D


F, J, H, I, G


Primary referenceRegulation of the NaV1.5 cytoplasmic domain by calmodulin., Gabelli SB, Boto A, Kuhns VH, Bianchet MA, Farinelli F, Aripirala S, Yoder J, Jakoncic J, Tomaselli GF, Amzel LM, Nat Commun. 2014 Nov 5;5:5126. doi: 10.1038/ncomms6126. PMID:25370050
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (720 Kb) [Save to disk]
  • Biological Unit Coordinates (4ovn.pdb1.gz) 144 Kb
  • Biological Unit Coordinates (4ovn.pdb2.gz) 144 Kb
  • Biological Unit Coordinates (4ovn.pdb3.gz) 147 Kb
  • Biological Unit Coordinates (4ovn.pdb4.gz) 142 Kb
  • Biological Unit Coordinates (4ovn.pdb5.gz) 147 Kb
  • LPC: Ligand-Protein Contacts for 4OVN
  • CSU: Contacts of Structural Units for 4OVN
  • Structure Factors (2582 Kb)
  • Retrieve 4OVN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OVN from S2C, [Save to disk]
  • Re-refined 4ovn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4OVN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4OVN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OVN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ovn_C] [4ovn_G] [4ovn_J] [4ovn_A] [4ovn] [4ovn_B] [4ovn_I] [4ovn_D] [4ovn_F] [4ovn_H] [4ovn_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4OVN: [EFh] [IQ ] by SMART
    • Other resources with information on 4OVN
  • Community annotation for 4OVN at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science