OCA Atlas for 4P4H

4P4H

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
N, O, J, I, K, P, M, L

Primary reference

Molecular Imprinting as a Signal-Activation Mechanism of the Viral RNA Sensor RIG-I., Wu B, Peisley A, Tetrault D, Li Z, Egelman EH, Magor KE, Walz T, Penczek PA, Hur S, Mol Cell. 2014 Jul 9. pii: S1097-2765(14)00492-4. doi:, 10.1016/j.molcel.2014.06.010. PMID:25018021

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1343 Kb) [Save to disk]

Biological Unit Coordinates (4p4h.pdb1.gz) 1331 Kb

CSU: Contacts of Structural Units for 4P4H

Structure Factors (377 Kb)

Retrieve 4P4H in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4P4H from S2C, [Save to disk]

Re-refined 4p4h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4P4H in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4p4h] [4p4h_A] [4p4h_B] [4p4h_C] [4p4h_D] [4p4h_E] [4p4h_F] [4p4h_G] [4p4h_H] [4p4h_I] [4p4h_J] [4p4h_K] [4p4h_L] [4p4h_M] [4p4h_N] [4p4h_O] [4p4h_P] [4p4h_S] [4p4h_T] [4p4h_U] [4p4h_W] [4p4h_X]

SWISS-PROT database:

Domain found in 4P4H: [UBQ ] by SMART

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