4P7H Motor Fluorescent Protein date Mar 27, 2014
title Structure Of Human Beta-Cardiac Myosin Motor Domain::Gfp Chi
authors D.A.Winkelmann, M.T.Miller, A.M.Stock
compound source
Molecule: Myosin-7,Green Fluorescent Protein
Chain: A, B
Fragment: Unp P12883 Residues 1-787,Unp P42212 Residues 5-2
Synonym: Myosin Heavy Chain 7,Myosin Heavy Chain Slow Isofo Slow,Myosin Heavy Chain,Cardiac Muscle Beta Isoform,Myhc-Be
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens, Aequorea Victoria
Organism_common: Human, Jellyfish
Organism_taxid: 9606, 6100
Organ: Heart
Tissue: Muscle
Gene: Myh7, Myhcb, Gfp
Expression_system: Mus
Expression_system_taxid: 10088
Expression_system_cell_line: C2c12
Expression_system_atcc_number: Crl 1772
Expression_system_organ: Skeletal Muscle
Expression_system_tissue: Muscle
Expression_system_cell: Myoblast
Expression_system_vector_type: Replication Defective Adenov
symmetry Space Group: P 1
R_factor 0.226 R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.690 97.730 118.610 71.06 82.67 75.08
method X-Ray Diffractionresolution 3.20 Å
ligand CRO, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceFolding of the striated muscle myosin motor domain., Chow D, Srikakulam R, Chen Y, Winkelmann DA, J Biol Chem. 2002 Sep 27;277(39):36799-807. Epub 2002 Jul 10. PMID:12110670
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (319 Kb) [Save to disk]
  • Biological Unit Coordinates (4p7h.pdb1.gz) 161 Kb
  • Biological Unit Coordinates (4p7h.pdb2.gz) 158 Kb
  • LPC: Ligand-Protein Contacts for 4P7H
  • CSU: Contacts of Structural Units for 4P7H
  • Structure Factors (410 Kb)
  • Retrieve 4P7H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4P7H from S2C, [Save to disk]
  • Re-refined 4p7h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4P7H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4P7H
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4P7H, from MSDmotif at EBI
  • Fold representative 4p7h from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4p7h_A] [4p7h] [4p7h_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4P7H: [MYSc ] by SMART
  • Other resources with information on 4P7H
  • Community annotation for 4P7H at PDBWiki (http://pdbwiki.org)

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