4P8B date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, MSE, X2X enzyme
Gene H16
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceExperimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes., Vetting MW, Al-Obaidi N, Zhao S, San Francisco B, Kim J, Wichelecki DJ, Bouvier JT, Solbiati JO, Vu H, Zhang X, Rodionov DA, Love JD, Hillerich BS, Seidel RD, Quinn RJ, Osterman AL, Cronan JE, Jacobson MP, Gerlt JA, Almo SC, Biochemistry. 2015 Jan 27;54(3):909-31. doi: 10.1021/bi501388y. Epub 2015 Jan 16. PMID:25540822
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (4p8b.pdb1.gz) 155 Kb
  • LPC: Ligand-Protein Contacts for 4P8B
  • CSU: Contacts of Structural Units for 4P8B
  • Structure Factors (4031 Kb)
  • Retrieve 4P8B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4P8B from S2C, [Save to disk]
  • Re-refined 4p8b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4P8B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4p8b] [4p8b_A]
  • SWISS-PROT database:

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