4PB6 Feline calicivirus VP1 T=1 virus-like particle date
authors Burmeister, W.P., Buisson, M.
compound source
symmetry
R_factor
R_Free 0.46285
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 8.00
Gene
Ontology
ChainFunctionProcessComponent
S, F, T, N, K, E, Q, M, C, L, A, J, O, P, B, H, D, R, I, G


Primary referenceStructure determination of feline calicivirus virus-like particles in the context of a pseudo-octahedral arrangement., Burmeister WP, Buisson M, Estrozi LF, Schoehn G, Billet O, Hannas Z, Sigoillot C, Poulet H, PLoS One. 2015 Mar 20;10(3):e0119289. doi: 10.1371/journal.pone.0119289., eCollection 2015. PMID:25794153
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1308 Kb) [Save to disk]
  • Biological Unit Coordinates (4pb6.pdb1.gz) 3878 Kb
  • CSU: Contacts of Structural Units for 4PB6
  • Structure Factors (888 Kb)
  • Retrieve 4PB6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PB6 from S2C, [Save to disk]
  • Re-refined 4pb6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4PB6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4PB6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4PB6, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pb6_G] [4pb6_J] [4pb6_N] [4pb6_P] [4pb6_K] [4pb6_M] [4pb6_O] [4pb6_E] [4pb6_F] [4pb6_T] [4pb6_L] [4pb6_R] [4pb6] [4pb6_D] [4pb6_I] [4pb6_Q] [4pb6_H] [4pb6_S] [4pb6_C] [4pb6_A] [4pb6_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4PB6
  • Community annotation for 4PB6 at PDBWiki (http://pdbwiki.org)

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