4PEG	Dbr1 in complex with guanosine-5'-monophosphate	date
authors	Montemayor, E.J., Katolik, A., Clark, N.E., Taylor, A.B., Schuermann, J.P., Combs, D.J., Johnsson, R., Holloway, S.P., Stevens, S.W., Damha, M.J., Hart, P.J.
compound		source
symmetry		R_factor R_Free 0.2291
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.00
ligand	5GP, GOL, MN, SO4	enzyme
Gene	EHI
Gene Ontology	Chain Function Process Component A, D, C, E, B RNA lariat debranching enzym...
Primary reference	Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1., Montemayor EJ, Katolik A, Clark NE, Taylor AB, Schuermann JP, Combs DJ, Johnsson R, Holloway SP, Stevens SW, Damha MJ, Hart PJ, Nucleic Acids Res. 2014 Aug 14. pii: gku725. PMID:25123664

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (315 Kb) [Save to disk] Biological Unit Coordinates (4peg.pdb1.gz) 66 Kb Biological Unit Coordinates (4peg.pdb2.gz) 67 Kb Biological Unit Coordinates (4peg.pdb3.gz) 66 Kb Biological Unit Coordinates (4peg.pdb4.gz) 65 Kb Biological Unit Coordinates (4peg.pdb5.gz) 65 Kb LPC: Ligand-Protein Contacts for 4PEG CSU: Contacts of Structural Units for 4PEG Structure Factors (2710 Kb) Retrieve 4PEG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4PEG from S2C, [Save to disk] Re-refined 4peg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4PEG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4PEG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4PEG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4peg] [4peg_E] [4peg_B] [4peg_C] [4peg_A] [4peg_D] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4PEG

Community annotation for 4PEG at PDBWiki (http://pdbwiki.org)

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