4PIV Transferase Transferase Inhibitor date May 09, 2014
title Human Fatty Acid Synthase Psikr Tri-Domain With Nadph And G
authors S.P.Williams, L.Wang, K.K.Brown, C.A.Parrish, M.A.Hardwicke
compound source
Molecule: Fatty Acid Synthase
Chain: A, B
Fragment: Psikr Tri-Domain (Unp Residues 1110-1524, 1877-2
Ec: 2.3.1.85
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fasn, Fas
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 1
R_factor 0.214 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.221 85.761 85.995 65.49 89.96 87.22
method X-Ray Diffractionresolution 2.30 Å
ligand 2W4, CAC, NDP, SO4 enzyme Transferase E.C.2.3.1.85 BRENDA
Primary referenceA human fatty acid synthase inhibitor binds beta-ketoacyl reductase in the keto-substrate site., Hardwicke MA, Rendina AR, Williams SP, Moore ML, Wang L, Krueger JA, Plant RN, Totoritis RD, Zhang G, Briand J, Burkhart WA, Brown KK, Parrish CA, Nat Chem Biol. 2014 Sep;10(9):774-9. doi: 10.1038/nchembio.1603. Epub 2014 Aug 3. PMID:25086508
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (385 Kb) [Save to disk]
  • Biological Unit Coordinates (4piv.pdb1.gz) 191 Kb
  • Biological Unit Coordinates (4piv.pdb2.gz) 192 Kb
  • LPC: Ligand-Protein Contacts for 4PIV
  • CSU: Contacts of Structural Units for 4PIV
  • Structure Factors (1817 Kb)
  • Retrieve 4PIV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PIV from S2C, [Save to disk]
  • Re-refined 4piv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4PIV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4PIV
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4PIV, from MSDmotif at EBI
  • Fold representative 4piv from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4piv_A] [4piv_B] [4piv]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4PIV: [PKS_KR ] by SMART
  • Other resources with information on 4PIV
  • Community annotation for 4PIV at PDBWiki (http://pdbwiki.org)

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