4POD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BR, K, NA, PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceTriosephosphate isomerase I170V alters catalytic site, enhances stability and induces pathology in a Drosophila model of TPI deficiency., Roland BP, Amrich CG, Kammerer CJ, Stuchul KA, Larsen SB, Rode S, Aslam AA, Heroux A, Wetzel R, VanDemark AP, Palladino MJ, Biochim Biophys Acta. 2015 Jan;1852(1):61-9. doi: 10.1016/j.bbadis.2014.10.010., Epub 2014 Oct 16. PMID:25463631
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk]
  • Biological Unit Coordinates (4pod.pdb1.gz) 224 Kb
  • LPC: Ligand-Protein Contacts for 4POD
  • CSU: Contacts of Structural Units for 4POD
  • Structure Factors (428 Kb)
  • Retrieve 4POD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4POD from S2C, [Save to disk]
  • Re-refined 4pod structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4POD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pod] [4pod_A] [4pod_B]
  • SWISS-PROT database:

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