4PPX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand NA, SDH enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal Structure of DNA Polymerase beta with DNA Containing the Base Lesion Spiroiminodihydantoin in a Templating Position., Eckenroth BE, Fleming AM, Sweasy JB, Burrows CJ, Doublie S, Biochemistry. 2014 Mar 26. PMID:24649945
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk]
  • Biological Unit Coordinates (4ppx.pdb1.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 4PPX
  • CSU: Contacts of Structural Units for 4PPX
  • Structure Factors (1850 Kb)
  • Retrieve 4PPX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PPX from S2C, [Save to disk]
  • Re-refined 4ppx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4PPX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ppx] [4ppx_A] [4ppx_D] [4ppx_P] [4ppx_T]
  • SWISS-PROT database:
  • Domains found in 4PPX: [HhH1] [POLXc ] by SMART

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