4PXJ Crystallographic structure of the LZII fragment (anti-parallel orientation) from JIP3 date
authors Llinas, P., Menetrey, J.
compound source
symmetry
R_factor
R_Free 0.205
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.06
ligand EDO, GAI, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructure of a truncated form of leucine zipper II of JIP3 reveals an unexpected antiparallel coiled-coil arrangement., Llinas P, Chenon M, Nguyen TQ, Moreira C, de Regibus A, Coquard A, Ramos MJ, Guerois R, Fernandes PA, Menetrey J, Acta Crystallogr F Struct Biol Commun. 2016 Mar;72(Pt 3):198-206. doi:, 10.1107/S2053230X16001576. Epub 2016 Feb 16. PMID:26919523
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (4pxj.pdb1.gz) 21 Kb
  • Biological Unit Coordinates (4pxj.pdb2.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 4PXJ
  • CSU: Contacts of Structural Units for 4PXJ
  • Structure Factors (293 Kb)
  • Retrieve 4PXJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PXJ from S2C, [Save to disk]
  • Re-refined 4pxj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4PXJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4PXJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4PXJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pxj] [4pxj_B] [4pxj_C] [4pxj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4PXJ
  • Community annotation for 4PXJ at PDBWiki (http://pdbwiki.org)

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