4PYI	Transferase	date	Mar 27, 2014
title	Human Apo Comt
authors	A.Ehler, J.Benz, D.Schlatter, M.G.Rudolph
compound		source
Molecule: Catechol O-Methyltransferase Chain: A Fragment: Soluble Form, Unp Resideus 51-271 Ec: 2.1.1.6 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Comt Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1	R_factor 0.162 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 31.596 42.638 43.663 115.03 95.35 108.98
method	X-Ray Diffraction	resolution	1.35 Å
ligand	NA	enzyme	Transferase E.C.2.1.1.6 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Mapping the conformational space accessible to catechol-O-methyltransferase., Ehler A, Benz J, Schlatter D, Rudolph MG, Acta Crystallogr D Biol Crystallogr. 2014 Aug 1;70(Pt 8):2163-74. doi:, 10.1107/S1399004714012917. Epub 2014 Jul 25. PMID:25084335

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk] Biological Unit Coordinates (4pyi.pdb1.gz) 108 Kb LPC: Ligand-Protein Contacts for 4PYI CSU: Contacts of Structural Units for 4PYI Structure Factors (662 Kb) Retrieve 4PYI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4PYI from S2C, [Save to disk] Re-refined 4pyi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4PYI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4PYI

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 4PYI, from MSDmotif at EBI Fold representative 4pyi from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4pyi] [4pyi_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4PYI

Community annotation for 4PYI at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014 Bioinformatics Unit Weizmann Institute of Science

---