4Q29 Structural Genomics, Unknown Function date Apr 07, 2014
title Ensemble Refinement Of Plu4264 Protein From Photorhabdus Lum
authors F.Wang, K.Michalska, H.Li, R.Jedrzejczak, G.Babnigg, C.A.Bingman, R.Yennamalli, S.Weerth, M.D.Miller, M.G.Thomas, A.Joachimiak, G.N.Phillips Jr., Enzyme Discovery For Natural Product Biosy (Natpro), Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Plu4264 Protein
Chain: A, B
Engineered: Yes
Organism_scientific: Photorhabdus Luminescens Subsp. Laumon
Organism_taxid: 243265
Strain: Tt01
Gene: Plu4264
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.126 R_Free 0.155
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.738 147.687 83.843 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.35 Å
ligand MSE, NA, NI enzyme
Primary referenceStructure of a cupin protein Plu4264 from Photorhabdus luminescens subsp. laumondii TTO1 at 1.35 A resolution., Weerth RS, Michalska K, Bingman CA, Yennamalli RM, Li H, Jedrzejczak R, Wang F, Babnigg G, Joachimiak A, Thomas MG, Phillips GN, Proteins. 2014 Oct 30. doi: 10.1002/prot.24705. PMID:25354690
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3755 Kb) [Save to disk]
  • Biological Unit Coordinates (4q29.pdb1.gz) 190 Kb
  • LPC: Ligand-Protein Contacts for 4Q29
  • CSU: Contacts of Structural Units for 4Q29
  • Structure Factors (1319 Kb)
  • Retrieve 4Q29 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Q29 from S2C, [Save to disk]
  • View 4Q29 in 3D
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  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4Q29, from MSDmotif at EBI
  • Fold representative 4q29 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4q29_A] [4q29_B] [4q29]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4Q29
  • Community annotation for 4Q29 at PDBWiki (http://pdbwiki.org)

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