4Q9Z Transferase Transferase Inhibitor date May 02, 2014
title Human Protein Kinase C Theta In Complex With Compound35 ((1r (Azetidin-3-Ylamino)-1,8-Dimethyl-3,5-Dihydro[1,2,4]Triazin C][1,4]Benzoxazin-2(1h)-One)
authors M.A.Argiriadi, D.M.George
compound source
Molecule: Human Protein Kinase C Theta
Chain: A, B
Fragment: Kinase Domain
Synonym: Npkc-Theta
Ec: 2.7.11.13
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prkcq, Prkct
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: P 21 21 21
R_factor 0.219 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.954 78.575 146.966 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand NA, PZW, SEP enzyme Transferase E.C.2.7.11.13 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDiscovery of Selective and Orally Bioavailable Protein Kinase Ctheta (PKCtheta) Inhibitors from a Fragment Hit., George DM, Breinlinger EC, Friedman M, Zhang Y, Wang J, Argiriadi M, Bansal-Pakala P, Barth M, Duignan DB, Honore P, Lang Q, Mittelstadt S, Potin D, Rundell L, Edmunds JJ, J Med Chem. 2014 Jul 7. PMID:25000588
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (236 Kb) [Save to disk]
  • Biological Unit Coordinates (4q9z.pdb1.gz) 229 Kb
  • LPC: Ligand-Protein Contacts for 4Q9Z
  • CSU: Contacts of Structural Units for 4Q9Z
  • Structure Factors (253 Kb)
  • Retrieve 4Q9Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Q9Z from S2C, [Save to disk]
  • Re-refined 4q9z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Q9Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4Q9Z
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4Q9Z, from MSDmotif at EBI
  • Fold representative 4q9z from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4q9z_B] [4q9z] [4q9z_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4Q9Z: [S_TK_X] [S_TKc ] by SMART
  • Other resources with information on 4Q9Z
  • Community annotation for 4Q9Z at PDBWiki (http://pdbwiki.org)

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