4QIM Structure of the human smoothened receptor in complex with ANTA XV date
authors Wang, C., Wu, H., Evron, T., Vardy, E., Han, G.W., Huang, X.P., Hufeisen, S.J., Mangano, T.J., Urban, D.J., Katritch, V., Cherezov, V., Caron, M.G., Roth, B.L., Stevens, R.C., GPCR, GPCR.Network.
compound source
symmetry
R_factor
R_Free 0.2629
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.61
ligand A8T, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for Smoothened receptor modulation and chemoresistance to anticancer drugs., Wang C, Wu H, Evron T, Vardy E, Han GW, Huang XP, Hufeisen SJ, Mangano TJ, Urban DJ, Katritch V, Cherezov V, Caron MG, Roth BL, Stevens RC, Nat Commun. 2014 Jul 10;5:4355. doi: 10.1038/ncomms5355. PMID:25008467
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk]
  • Biological Unit Coordinates (4qim.pdb1.gz) 149 Kb
  • LPC: Ligand-Protein Contacts for 4QIM
  • CSU: Contacts of Structural Units for 4QIM
  • Structure Factors (430 Kb)
  • Retrieve 4QIM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QIM from S2C, [Save to disk]
  • Re-refined 4qim structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4QIM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4QIM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QIM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qim] [4qim_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QIM: [Frizzled ] by SMART
  • Other resources with information on 4QIM
  • Community annotation for 4QIM at PDBWiki (http://pdbwiki.org)

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