OCA Atlas for 4QIW

4QIW

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MG, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, J
D, O
F, R
I, A
K, T
L, U
M, C
P, W
Q, E
S, H
V, N

Primary reference

The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration., Jun SH, Hirata A, Kanai T, Santangelo TJ, Imanaka T, Murakami KS, Nat Commun. 2014 Oct 14;5:5132. doi: 10.1038/ncomms6132. PMID:25311937

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2182 Kb) [Save to disk]

Biological Unit Coordinates (4qiw.pdb1.gz) 1092 Kb

Biological Unit Coordinates (4qiw.pdb2.gz) 1088 Kb

LPC: Ligand-Protein Contacts for 4QIW

CSU: Contacts of Structural Units for 4QIW

Structure Factors (1777 Kb)

Retrieve 4QIW in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4QIW from S2C, [Save to disk]

Re-refined 4qiw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4QIW in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4qiw_T] [4qiw_I] [4qiw_R] [4qiw_H] [4qiw_J] [4qiw_K] [4qiw_S] [4qiw] [4qiw_L] [4qiw_A] [4qiw_M] [4qiw_B] [4qiw_N] [4qiw_C] [4qiw_O] [4qiw_D] [4qiw_P] [4qiw_E] [4qiw_Q] [4qiw_F] [4qiw_U] [4qiw_V] [4qiw_W]

SWISS-PROT database:

Domains found in 4QIW: [RPOLA_N] [RPOLCX] [RPOLD] [S1 ] by SMART

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