4QJU	Crystal structure of DNA-bound nucleoid associated protein, SAV1473	date
authors	Lee, B.J., Kim, D.H., Im, H., Yoon, H.J.
compound		source
symmetry		R_factor R_Free 0.2488
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.16
Gene Ontology	Chain Function Process Component A, B
Primary reference	beta-Arm flexibility of HU from Staphylococcus aureus dictates the DNA-binding and recognition mechanism., Kim do H, Im H, Jee JG, Jang SB, Yoon HJ, Kwon AR, Kang SM, Lee BJ, Acta Crystallogr D Biol Crystallogr. 2014 Dec 1;70(Pt 12):3273-89. doi:, 10.1107/S1399004714023931. Epub 2014 Nov 28. PMID:25478845

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk] Biological Unit Coordinates (4qju.pdb1.gz) 48 Kb CSU: Contacts of Structural Units for 4QJU Structure Factors (274 Kb) Retrieve 4QJU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4QJU from S2C, [Save to disk] Re-refined 4qju structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4QJU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4QJU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4QJU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4qju_C] [4qju_B] [4qju] [4qju_D] [4qju_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4QJU: [BHL ] by SMART

Other resources with information on 4QJU

Community annotation for 4QJU at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---