4QL3 Crystal Structure of a GDP-bound G12R Oncogenic Mutant of Human GTPase KRas date
authors Hunter, J.C., Manandhar, A., Gurbani, D., Chen, Z., Westover, K.D.
compound source
symmetry
R_factor
R_Free 0.1621
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.04
ligand GDP, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceBiochemical and Structural Analysis of Common Cancer-Associated KRAS Mutations., Hunter JC, Manandhar A, Carrasco MA, Gurbani D, Gondi S, Westover KD, Mol Cancer Res. 2015 Jun 2. pii: molcanres.0203.2015. PMID:26037647
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (4ql3.pdb1.gz) 84 Kb
  • LPC: Ligand-Protein Contacts for 4QL3
  • CSU: Contacts of Structural Units for 4QL3
  • Structure Factors (1125 Kb)
  • Retrieve 4QL3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QL3 from S2C, [Save to disk]
  • Re-refined 4ql3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4QL3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4QL3
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QL3, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ql3_A] [4ql3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QL3: [RAS ] by SMART
    • Other resources with information on 4QL3
  • Community annotation for 4QL3 at PDBWiki (http://pdbwiki.org)

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