4QOZ Crystal structure of the histone mRNA stem-loop, stem-loop binding protein (phosphorylated), and 3'hExo ternary complex date
authors Tan, D., Tong, L.
compound source
symmetry
R_factor
R_Free 0.2451
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand TPO enzyme
Gene
Ontology
ChainFunctionProcessComponent
C


E, B


Primary referenceMolecular mechanisms for the regulation of histone mRNA stem-loop-binding protein by phosphorylation., Zhang J, Tan D, DeRose EF, Perera L, Dominski Z, Marzluff WF, Tong L, Hall TM, Proc Natl Acad Sci U S A. 2014 Jul 7. pii: 201406381. PMID:25002523
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk]
  • Biological Unit Coordinates (4qoz.pdb1.gz) 74 Kb
  • Biological Unit Coordinates (4qoz.pdb2.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 4QOZ
  • CSU: Contacts of Structural Units for 4QOZ
  • Structure Factors (398 Kb)
  • Retrieve 4QOZ in mmCIF format [Save to disk]
  • Re-refined 4qoz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4QOZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4QOZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QOZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qoz_A] [4qoz_D] [4qoz_C] [4qoz] [4qoz_E] [4qoz_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4QOZ: [EXOIII] [SAP ] by SMART
  • Other resources with information on 4QOZ
  • Community annotation for 4QOZ at PDBWiki (http://pdbwiki.org)

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