4QQ5 Crystal Structure of FGF Receptor (FGFR) 4 Kinase Harboring the V550L Gate-Keeper Mutation in Complex With FIIN-2, an Irreversible Tyrosine Kinase Inhibitor Capable of Overcoming FGFR Kinase Gate-Keeper Mutations date
authors Huang, Z., Mohammadi, M.
compound source
symmetry
R_factor
R_Free 0.2338
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand 37O enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDFG-out Mode of Inhibition by an Irreversible Type-1 Inhibitor Capable of Overcoming Gate-Keeper Mutations in FGF Receptors., Huang Z, Tan L, Wang H, Liu Y, Blais S, Deng J, Neubert TA, Gray NS, Li X, Mohammadi M, ACS Chem Biol. 2014 Oct 27. PMID:25317566
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (4qq5.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (4qq5.pdb2.gz) 130 Kb
  • LPC: Ligand-Protein Contacts for 4QQ5
  • CSU: Contacts of Structural Units for 4QQ5
  • Structure Factors (289 Kb)
  • Retrieve 4QQ5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QQ5 from S2C, [Save to disk]
  • Re-refined 4qq5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4QQ5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4QQ5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QQ5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qq5] [4qq5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QQ5: [TyrKc ] by SMART
  • Other resources with information on 4QQ5
  • Community annotation for 4QQ5 at PDBWiki (http://pdbwiki.org)

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