4QQ6 Crystal Structure of tudor domain of SMN1 in complex with a small organic molecule date
authors Liu, Y., Tempel, W., Iqbal, A., Walker, J.R., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Brown, P.J., Min, J., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.2417
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.75
ligand 36X, UNX enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (4qq6.pdb1.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 4QQ6
  • CSU: Contacts of Structural Units for 4QQ6
  • Structure Factors (1514 Kb)
  • Retrieve 4QQ6 in mmCIF format [Save to disk]
  • Re-refined 4qq6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4QQ6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4QQ6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4QQ6, from MSDmotif at EBI
  • Fold representative 4qq6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qq6_A] [4qq6]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QQ6: [TUDOR ] by SMART
  • Other resources with information on 4QQ6
  • Community annotation for 4QQ6 at PDBWiki (http://pdbwiki.org)

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