4QT7	Transferase Transferase Activator	date	Jul 07, 2014
title	Crystal Structure Of The C-Src Sh3 Domain In Complex With A From The Hepatitis C Virus Ns5a-Protein
authors	A.Camara-Artigas, J.Bacarizo
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Src Chain: A Fragment: Sh3 Domain, Unp Residues 85-141 Synonym: Proto-Oncogene C-Src, Pp60c-Src, P60-Src Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Gallus Gallus Organism_common: Bantam,Chickens Organism_taxid: 9031 Gene: Src Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
Molecule: Ns5a Chain: B Fragment: Proline Rich Peptide, Unp Residues 349-359 Engineered: Yes		Synthetic: Yes Organism_scientific: Hepatitis C Virus Organism_taxid: 11103 Other_details: The Peptide Was Chemically Synthesized.
symmetry	Space Group: I 41	R_factor 0.159 R_Free 0.195
crystal cell	length a length b length c angle alpha angle beta angle gamma 62.307 62.307 27.266 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.55 Å
ligand	ACE	enzyme	Transferase E.C.2.7.10.2 BRENDA
Primary reference	Structure of the c-Src-SH3 domain in complex with a proline-rich motif of NS5A protein from the hepatitis C virus., Bacarizo J, Martinez-Rodriguez S, Camara-Artigas A, J Struct Biol. 2014 Nov 25. pii: S1047-8477(14)00242-1. doi:, 10.1016/j.jsb.2014.11.004. PMID:25447263

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (4qt7.pdb1.gz) 30 Kb LPC: Ligand-Protein Contacts for 4QT7 CSU: Contacts of Structural Units for 4QT7 Structure Factors (123 Kb) Retrieve 4QT7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4QT7 from S2C, [Save to disk] Re-refined 4qt7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4QT7 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4QT7

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4QT7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4qt7_A] [4qt7] [4qt7_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4QT7: [SH3 ] by SMART

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