4R06 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 3E7, SO4 enzyme
Gene PPARG (H. sapiens)
Gene
Ontology
ChainFunctionProcessComponent
A, B


Disease Carotid intimal medial thickness 1 OMIM:601487
Insulin resistance, severe, digenic OMIM:601487
Lipodystrophy, familial partial, type 3 OMIM:601487
Obesity, severe OMIM:601487
Obesity, resistance to OMIM:601487
Diabetes, type 2 OMIM:601487
Glioblastoma, susceptibility to OMIM:601487
Primary referenceSR2067 Reveals a Unique Kinetic and Structural Signature for PPARgamma Partial Agonism., van Marrewijk LM, Polyak SW, Hijnen M, Kuruvilla D, Chang MR, Shin Y, Kamenecka TM, Griffin PR, Bruning JB, ACS Chem Biol. 2016 Jan 15;11(1):273-83. doi: 10.1021/acschembio.5b00580. Epub, 2015 Dec 3. PMID:26579553
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (177 Kb) [Save to disk]
  • Biological Unit Coordinates (4r06.pdb1.gz) 170 Kb
  • LPC: Ligand-Protein Contacts for 4R06
  • CSU: Contacts of Structural Units for 4R06
  • Structure Factors (1830 Kb)
  • Retrieve 4R06 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4R06 from S2C, [Save to disk]
  • Re-refined 4r06 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4R06 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4r06] [4r06_A] [4r06_B]
  • SWISS-PROT database:
  • Domain found in 4R06: [HOLI ] by SMART

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