OCA Atlas for 4R4N

4R4N

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

DPR, MPT, NAG, NH2, OAS, U2X

enzyme

Gene
Ontology

Chain	Function	Process	Component
S, A, M, E, B, I, P, V

Primary reference

Structural Definition of an Antibody-Dependent Cellular Cytotoxicity (ADCC) Response Implicated in Reduced Risk for HIV-1 Infection., Acharya P, Tolbert WD, Gohain N, Wu X, Yu L, Liu T, Huang W, Huang CC, Do Kwon Y, Louder RK, Luongo TS, McLellan JS, Pancera M, Yang Y, Zhang B, Flinko R, Foulke JS Jr, Sajadi MM, Kamin-Lewis R, Robinson JE, Martin L, Kwong PD, Guan Y, DeVico AL, Lewis GK, Pazgier M, J Virol. 2014 Aug 27. pii: JVI.02194-14. PMID:25165110

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3046 Kb) [Save to disk]

Biological Unit Coordinates (4r4n.pdb1.gz) 391 Kb

Biological Unit Coordinates (4r4n.pdb2.gz) 394 Kb

Biological Unit Coordinates (4r4n.pdb3.gz) 394 Kb

Biological Unit Coordinates (4r4n.pdb4.gz) 387 Kb

Biological Unit Coordinates (4r4n.pdb5.gz) 394 Kb

Biological Unit Coordinates (4r4n.pdb6.gz) 394 Kb

Biological Unit Coordinates (4r4n.pdb7.gz) 392 Kb

Biological Unit Coordinates (4r4n.pdb8.gz) 395 Kb

LPC: Ligand-Protein Contacts for 4R4N

CSU: Contacts of Structural Units for 4R4N

Structure Factors (1744 Kb)

Retrieve 4R4N in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4R4N from S2C, [Save to disk]

Re-refined 4r4n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4R4N in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4r4n] [4r4n_A] [4r4n_B] [4r4n_C] [4r4n_D] [4r4n_E] [4r4n_F] [4r4n_G] [4r4n_H] [4r4n_I] [4r4n_J] [4r4n_K] [4r4n_L] [4r4n_M] [4r4n_N] [4r4n_O] [4r4n_P] [4r4n_Q] [4r4n_R] [4r4n_S] [4r4n_T] [4r4n_U] [4r4n_V] [4r4n_W] [4r4n_X] [4r4n_a] [4r4n_b] [4r4n_e] [4r4n_i] [4r4n_m] [4r4n_p] [4r4n_s] [4r4n_v]

SWISS-PROT database:

Domains found in 4R4N: [IG_like] [IGv ] by SMART

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