4R8I date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 0A, 0C, 0G, 0U, 0U1, K, NA, SR enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of a mirror-image L-RNA aptamer (Spiegelmer) in complex with the natural L-protein target CCL2., Oberthur D, Achenbach J, Gabdulkhakov A, Buchner K, Maasch C, Falke S, Rehders D, Klussmann S, Betzel C, Nat Commun. 2015 Apr 22;6:6923. doi: 10.1038/ncomms7923. PMID:25901662
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (4r8i.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 4R8I
  • CSU: Contacts of Structural Units for 4R8I
  • Structure Factors (257 Kb)
  • Retrieve 4R8I in mmCIF format [Save to disk]
  • Re-refined 4r8i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4R8I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4r8i] [4r8i_A] [4r8i_B]
  • SWISS-PROT database:
  • Domain found in 4R8I: [SCY ] by SMART

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science