4RCE Crystal structure of BACE1 in complex with aminooxazoline xanthene inhibitor 2 date
authors Whittington, D.A., Long, A.M.
compound source
symmetry
R_factor
R_Free 0.2477
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand 3LN, IOD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceLead Optimization and Modulation of hERG Activity in a Series of Aminooxazoline Xanthene beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE1) Inhibitors., Epstein O, Bryan MC, Cheng AC, Derakhchan K, Dineen TA, Hickman D, Hua Z, Human JB, Kreiman C, Marx IE, Weiss MM, Wahl RC, Wen PH, Whittington DA, Wood S, Zheng XM, Fremeau RT Jr, White RD, Patel VF, J Med Chem. 2014 Dec 11;57(23):9796-810. doi: 10.1021/jm501266w. Epub 2014 Nov, 12. PMID:25389560
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (4rce.pdb1.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 4RCE
  • CSU: Contacts of Structural Units for 4RCE
  • Structure Factors (584 Kb)
  • Retrieve 4RCE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4RCE from S2C, [Save to disk]
  • Re-refined 4rce structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4RCE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4RCE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4RCE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rce_A] [4rce]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4RCE
  • Community annotation for 4RCE at PDBWiki (http://pdbwiki.org)

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