4RDM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
Gene NGK
Primary referenceCrystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII., Tamulaitiene G, Silanskas A, Grazulis S, Zaremba M, Siksnys V, Nucleic Acids Res. 2014 Dec 16;42(22):14022-30. doi: 10.1093/nar/gku1237. Epub, 2014 Nov 27. PMID:25429979
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk]
  • Biological Unit Coordinates (4rdm.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (4rdm.pdb2.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 4RDM
  • CSU: Contacts of Structural Units for 4RDM
  • Structure Factors (684 Kb)
  • Retrieve 4RDM in mmCIF format [Save to disk]
  • Re-refined 4rdm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4RDM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rdm] [4rdm_A] [4rdm_B] [4rdm_C] [4rdm_D] [4rdm_E] [4rdm_F]
  • SWISS-PROT database:

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