4RED Crystal structure of human AMPK alpha1 KD-AID with K43A mutation date
authors Zhou, X.E., Ke, J., Li, X., Wang, L., Gu, X., Waal, P.W.de., Tan, M.H.E., Wang, D., Wu, D., Xu, H.E., Melcher, K.
compound source
symmetry
R_factor
R_Free 0.27681
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.95
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural basis of AMPK regulation by adenine nucleotides and glycogen., Li X, Wang L, Zhou XE, Ke J, de Waal PW, Gu X, Tan MH, Wang D, Wu D, Xu HE, Melcher K, Cell Res. 2014 Nov 21. doi: 10.1038/cr.2014.150. PMID:25412657
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk]
  • Biological Unit Coordinates (4red.pdb1.gz) 210 Kb
  • Biological Unit Coordinates (4red.pdb2.gz) 106 Kb
  • Biological Unit Coordinates (4red.pdb3.gz) 106 Kb
  • CSU: Contacts of Structural Units for 4RED
  • Structure Factors (285 Kb)
  • Retrieve 4RED in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4RED from S2C, [Save to disk]
  • Re-refined 4red structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4RED in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4RED
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4RED, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4red_B] [4red_A] [4red]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4RED: [S_TKc ] by SMART
    • Other resources with information on 4RED
  • Community annotation for 4RED at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science