4RFO date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DPR, MPT, NAG, NH2, U2X enzyme
Gene
Ontology
ChainFunctionProcessComponent
G


Primary referenceCo-crystal structures of antibody N60-i3 and antibody JR4 in complex with gp120 define more Cluster A epitopes involved in effective antibody-dependent effector function against HIV-1., Gohain N, Tolbert WD, Acharya P, Yu L, Liu T, Zhao P, Orlandi C, Visciano ML, Kamin-Lewis R, Sajadi MM, Martin L, Robinson JE, Kwong PD, DeVico AL, Ray K, Lewis GK, Pazgier M, J Virol. 2015 Jun 17. pii: JVI.01232-15. PMID:26085162
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (271 Kb) [Save to disk]
  • Biological Unit Coordinates (4rfo.pdb1.gz) 262 Kb
  • LPC: Ligand-Protein Contacts for 4RFO
  • CSU: Contacts of Structural Units for 4RFO
  • Structure Factors (442 Kb)
  • Retrieve 4RFO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4RFO from S2C, [Save to disk]
  • Re-refined 4rfo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4RFO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rfo] [4rfo_G] [4rfo_H] [4rfo_L] [4rfo_N]
  • SWISS-PROT database:
  • Domains found in 4RFO: [IG_like] [IGv ] by SMART

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