4RHD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 1W5, 1WA, MG, T5S enzyme
Primary referenceEvolution of functional six-nucleotide DNA., Zhang L, Yang Z, Sefah K, Bradley KM, Hoshika S, Kim MJ, Kim HJ, Zhu G, Jimenez E, Cansiz S, Teng IT, Champanhac C, McLendon C, Liu C, Zhang W, Gerloff DL, Huang Z, Tan W, Benner SA, J Am Chem Soc. 2015 Jun 3;137(21):6734-7. doi: 10.1021/jacs.5b02251. Epub 2015, May 20. PMID:25966323
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (4rhd.pdb1.gz) 9 Kb
  • Biological Unit Coordinates (4rhd.pdb2.gz) 9 Kb
  • Biological Unit Coordinates (4rhd.pdb3.gz) 9 Kb
  • Biological Unit Coordinates (4rhd.pdb4.gz) 9 Kb
  • LPC: Ligand-Protein Contacts for 4RHD
  • CSU: Contacts of Structural Units for 4RHD
  • Structure Factors (706 Kb)
  • Retrieve 4RHD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4RHD from S2C, [Save to disk]
  • Re-refined 4rhd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4RHD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rhd] [4rhd_A] [4rhd_B] [4rhd_C] [4rhd_D] [4rhd_E] [4rhd_F] [4rhd_G] [4rhd_H]
  • SWISS-PROT database:

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