4RLL Crystal structure of human CK2alpha in complex with the ATP-competitive inhibitor 4-[(E)-(fluoren-9-ylidenehydrazinylidene)-methyl] benzoate date
authors Guerra, B., Rasmussen, T.D.L., Schnitzler, A., Jensen, H.H., Boldyreff, B.S., Miyata, Y., Marcussen, N., Niefind, K., Issinger, O.G.
compound source
symmetry
R_factor
R_Free 0.2133
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand E91, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceProtein kinase CK2 inhibition is associated with the destabilization of HIF-1alpha in human cancer cells., Guerra B, Rasmussen TD, Schnitzler A, Jensen HH, Boldyreff BS, Miyata Y, Marcussen N, Niefind K, Issinger OG, Cancer Lett. 2015 Jan 28;356(2 Pt B):751-61. doi: 10.1016/j.canlet.2014.10.026., Epub 2014 Oct 28. PMID:25449433
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (4rll.pdb1.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 4RLL
  • CSU: Contacts of Structural Units for 4RLL
  • Structure Factors (242 Kb)
  • Retrieve 4RLL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4RLL from S2C, [Save to disk]
  • Re-refined 4rll structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4RLL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4RLL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4RLL, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rll] [4rll_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4RLL: [S_TKc ] by SMART
  • Other resources with information on 4RLL
  • Community annotation for 4RLL at PDBWiki (http://pdbwiki.org)

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