4RLO Human p70s6k1 with ruthenium-based inhibitor EM5 date
authors Domsic, J.F., Barber-Rotenberg, J., Salami, J., Qin, J., Marmorstein, R.
compound source
symmetry
R_factor
R_Free 0.2221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.53
ligand 3T3, CL, DMS, GOL, SO4, STU enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDevelopment of Organometallic S6K1 Inhibitors., Qin J, Rajaratnam R, Feng L, Salami J, Barber-Rotenberg JS, Domsic J, Reyes-Uribe P, Liu H, Dang W, Berger SL, Villanueva J, Meggers E, Marmorstein R, J Med Chem. 2015 Jan 8;58(1):305-14. doi: 10.1021/jm5011868. Epub 2014 Nov 13. PMID:25356520
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (173 Kb) [Save to disk]
  • Biological Unit Coordinates (4rlo.pdb1.gz) 85 Kb
  • Biological Unit Coordinates (4rlo.pdb2.gz) 84 Kb
  • Biological Unit Coordinates (4rlo.pdb3.gz) 166 Kb
  • LPC: Ligand-Protein Contacts for 4RLO
  • CSU: Contacts of Structural Units for 4RLO
  • Structure Factors (310 Kb)
  • Retrieve 4RLO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4RLO from S2C, [Save to disk]
  • Re-refined 4rlo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4RLO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4RLO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4RLO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rlo_A] [4rlo] [4rlo_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4RLO: [S_TKc ] by SMART
  • Other resources with information on 4RLO
  • Community annotation for 4RLO at PDBWiki (http://pdbwiki.org)

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