4RXX Crystal Structure of the N-terminal Domain of Human Ubiquitin Specific Protease 38 date
authors Dong, A., Shen, L., Hu, J., Li, Y., Tempel, W., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Tong, Y., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.2419
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.06
ligand CL, EDO, MSE, UNX enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (4rxx.pdb1.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 4RXX
  • CSU: Contacts of Structural Units for 4RXX
  • Structure Factors (1738 Kb)
  • Retrieve 4RXX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4RXX from S2C, [Save to disk]
  • Re-refined 4rxx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4RXX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4RXX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4RXX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rxx_A] [4rxx]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4RXX
  • Community annotation for 4RXX at PDBWiki (http://pdbwiki.org)

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