OCA Atlas for 4RYD

4RYD

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

00S, 2UE, CA, FMT, NA, TBG

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, E, F, B, D, C

Primary reference

Novel Furin Inhibitors with Potent Anti-infectious Activity., Hardes K, Becker GL, Lu Y, Dahms SO, Kohler S, Beyer W, Sandvig K, Yamamoto H, Lindberg I, Walz L, von Messling V, Than ME, Garten W, Steinmetzer T, ChemMedChem. 2015 May 14. doi: 10.1002/cmdc.201500103. PMID:25974265

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (480 Kb) [Save to disk]

Biological Unit Coordinates (4ryd.pdb1.gz) 86 Kb

Biological Unit Coordinates (4ryd.pdb2.gz) 85 Kb

Biological Unit Coordinates (4ryd.pdb3.gz) 86 Kb

Biological Unit Coordinates (4ryd.pdb4.gz) 85 Kb

Biological Unit Coordinates (4ryd.pdb5.gz) 86 Kb

Biological Unit Coordinates (4ryd.pdb6.gz) 85 Kb

LPC: Ligand-Protein Contacts for 4RYD

CSU: Contacts of Structural Units for 4RYD

Structure Factors (1125 Kb)

Retrieve 4RYD in mmCIF format [Save to disk]

Re-refined 4ryd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4RYD in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ryd] [4ryd_A] [4ryd_B] [4ryd_C] [4ryd_D] [4ryd_E] [4ryd_F] [4ryd_H] [4ryd_I] [4ryd_J] [4ryd_K] [4ryd_L] [4ryd_N]

SWISS-PROT database:

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