4S3E IspG in complex with Inhibitor 7 (compound 1061) date
authors Quitterer, F., Frank, A., Wang, K., Rao, G., Dowd, B.O., Li, J., Guerra, F., Abdel-Azeim, S., Bacher, A., Eppinger, J., Oldfield, E., Groll, M.
compound source
symmetry
R_factor
R_Free 0.14332
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.35
ligand 0CG, GOL, KCX, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAtomic-Resolution Structures of Discrete Stages on the Reaction Coordinate of the [FeS] Enzyme IspG (GcpE)., Quitterer F, Frank A, Wang K, Rao G, O'Dowd B, Li J, Guerra F, Abdel-Azeim S, Bacher A, Eppinger J, Oldfield E, Groll M, J Mol Biol. 2015 Apr 11. pii: S0022-2836(15)00225-9. doi:, 10.1016/j.jmb.2015.04.002. PMID:25868383
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (153 Kb) [Save to disk]
  • Biological Unit Coordinates (4s3e.pdb1.gz) 291 Kb
  • LPC: Ligand-Protein Contacts for 4S3E
  • CSU: Contacts of Structural Units for 4S3E
  • Structure Factors (1803 Kb)
  • Retrieve 4S3E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4S3E from S2C, [Save to disk]
  • Re-refined 4s3e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4S3E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4S3E
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4S3E, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4s3e] [4s3e_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4S3E
  • Community annotation for 4S3E at PDBWiki (http://pdbwiki.org)

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