4S3L Crystal Structure of major pilin protein PitB from type II pilus of Streptococcus pneumoniae date
authors Shaik, M.M., Dessen, A., Guilmi, A.M.Di.
compound source
symmetry
R_factor
R_Free 0.2977
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
Primary referenceA structural snapshot of type II pilus formation in Streptococcus pneumoniae., Shaik MM, Lombardi C, Maragno Trindade D, Fenel D, Schoehn G, Di Guilmi AM, Dessen A, J Biol Chem. 2015 Jul 21. pii: jbc.M115.647834. PMID:26198632
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk]
  • Biological Unit Coordinates (4s3l.pdb1.gz) 55 Kb
  • Biological Unit Coordinates (4s3l.pdb2.gz) 55 Kb
  • CSU: Contacts of Structural Units for 4S3L
  • Structure Factors (1436 Kb)
  • Retrieve 4S3L in mmCIF format [Save to disk]
  • Re-refined 4s3l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4S3L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4S3L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4s3l_A] [4s3l] [4s3l_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4S3L: [FN3 ] by SMART
  • Other resources with information on 4S3L
  • Community annotation for 4S3L at PDBWiki (http://pdbwiki.org)

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