4TO1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DCP, DTP, GTP, MG enzyme
Primary referenceStructural basis of cellular dNTP regulation by SAMHD1., Ji X, Tang C, Zhao Q, Wang W, Xiong Y, Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):E4305-14. doi:, 10.1073/pnas.1412289111. Epub 2014 Sep 29. PMID:25267621
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (684 Kb) [Save to disk]
  • Biological Unit Coordinates (4to1.pdb1.gz) 675 Kb
  • LPC: Ligand-Protein Contacts for 4TO1
  • CSU: Contacts of Structural Units for 4TO1
  • Structure Factors (3346 Kb)
  • Retrieve 4TO1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TO1 from S2C, [Save to disk]
  • Re-refined 4to1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4TO1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4TO1
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4TO1, from MSDmotif at EBI
  • Fold representative 4to1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4to1] [4to1_A] [4to1_B] [4to1_C] [4to1_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4TO1: [HDc ] by SMART
  • Other resources with information on 4TO1
  • Community annotation for 4TO1 at PDBWiki (http://pdbwiki.org)

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