4TOD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HEM, K enzyme
Gene
Ontology
ChainFunctionProcessComponent
R, N, G, C, E, J, V, W, T, X, M, B, P, F, K, D, O, A, L, S, U, Q, I, H


Primary referenceConcerted Motions Networking Pores and Distant Ferroxidase Centers Enable Bacterioferritin Function and Iron Traffic., Yao H, Rui H, Kumar R, Eshelman K, Lovell S, Battaile KP, Im W, Rivera M, Biochemistry. 2015 Jan 31. PMID:25640193
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (651 Kb) [Save to disk]
  • Biological Unit Coordinates (4tod.pdb1.gz) 639 Kb
  • LPC: Ligand-Protein Contacts for 4TOD
  • CSU: Contacts of Structural Units for 4TOD
  • Structure Factors (18124 Kb)
  • Retrieve 4TOD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TOD from S2C, [Save to disk]
  • Re-refined 4tod structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4TOD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tod] [4tod_A] [4tod_B] [4tod_C] [4tod_D] [4tod_E] [4tod_F] [4tod_G] [4tod_H] [4tod_I] [4tod_J] [4tod_K] [4tod_L] [4tod_M] [4tod_N] [4tod_O] [4tod_P] [4tod_Q] [4tod_R] [4tod_S] [4tod_T] [4tod_U] [4tod_V] [4tod_W] [4tod_X]
  • SWISS-PROT database:

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