4TQ1 Crystal structure of human ATG5-TECAIR date
authors Kim, J.H., Hong, S.B., Song, H.K.
compound source
symmetry
R_factor
R_Free 0.2224
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInsights into autophagosome maturation revealed by the structures of ATG5 with its interacting partners., Kim JH, Hong SB, Lee JK, Han S, Roh KH, Lee KE, Kim YK, Choi EJ, Song HK, Autophagy. 2015 Jan 2;11(1):75-87. doi: 10.4161/15548627.2014.984276. PMID:25484072
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (4tq1.pdb1.gz) 104 Kb
  • CSU: Contacts of Structural Units for 4TQ1
  • Structure Factors (430 Kb)
  • Retrieve 4TQ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TQ1 from S2C, [Save to disk]
  • Re-refined 4tq1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4TQ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4TQ1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4TQ1, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tq1_B] [4tq1_A] [4tq1]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4TQ1
  • Community annotation for 4TQ1 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science