4TT9 Structure of the C-terminal SpoA domain of Shigella flexneri Spa33 date
authors McDowell, M.A., Johnson, S., Lea, S.M.
compound source
symmetry
R_factor
R_Free 0.2099
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCharacterisation of Shigella Spa33 and Thermotoga FliM/N reveals a new model for C-ring assembly in T3SS., McDowell MA, Marcoux J, McVicker G, Johnson S, Fong YH, Stevens R, Bowman LA, Degiacomi MT, Yan J, Wise A, Friede M, Benesch JL, Deane JE, Tang CM, Robinson CV, Lea SM, Mol Microbiol. 2015 Nov 5. doi: 10.1111/mmi.13267. PMID:26538516
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk]
  • Biological Unit Coordinates (4tt9.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (4tt9.pdb2.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 4TT9
  • CSU: Contacts of Structural Units for 4TT9
  • Structure Factors (243 Kb)
  • Retrieve 4TT9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TT9 from S2C, [Save to disk]
  • Re-refined 4tt9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4TT9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4TT9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tt9] [4tt9_D] [4tt9_A] [4tt9_C] [4tt9_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4TT9
  • Community annotation for 4TT9 at PDBWiki (http://pdbwiki.org)

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