4TUG Crystal structure of MjMre11-DNA2 complex date
authors Sung, S., Cho, Y.
compound source
symmetry
R_factor
R_Free 0.2358
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.55
ligand MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B
  • nuclease activity
  • endonuclease activity
  • exonuclease activity
  • 3'-5' exonuclease activity


    • Primary referenceDNA end recognition by the Mre11 nuclease dimer: insights into resection and repair of damaged DNA., Sung S, Li F, Park YB, Kim JS, Kim AK, Song OK, Kim J, Che J, Lee SE, Cho Y, EMBO J. 2014 Oct 16;33(20):2422-35. doi: 10.15252/embj.201488299. Epub 2014 Aug, 8. PMID:25107472
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (678 Kb) [Save to disk]
  • Biological Unit Coordinates (4tug.pdb1.gz) 668 Kb
  • LPC: Ligand-Protein Contacts for 4TUG
  • CSU: Contacts of Structural Units for 4TUG
  • Structure Factors (411 Kb)
  • Retrieve 4TUG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TUG from S2C, [Save to disk]
  • Re-refined 4tug structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4TUG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4TUG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4TUG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tug_B] [4tug] [4tug_D] [4tug_E] [4tug_H] [4tug_G] [4tug_A] [4tug_F] [4tug_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4TUG
  • Community annotation for 4TUG at PDBWiki (http://pdbwiki.org)

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