4TYV Ensemble refinement of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with glucose date
authors Bianchetti, C.M., Takasuka, T.E., Yik, E.J., Bergeman, L.F., Fox, B.G.
compound source
symmetry
R_factor
R_Free 0.143
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.75
ligand BGC, EDO enzyme
Gene SACTE
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceActive site and laminarin binding in glycoside hydrolase family 55., Bianchetti CM, Takasuka TE, Deutsch S, Udell HS, Yik EJ, Bergeman LF, Fox BG, J Biol Chem. 2015 Mar 9. pii: jbc.M114.623579. PMID:25752603
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (14808 Kb) [Save to disk]
  • Biological Unit Coordinates (4tyv.pdb1.gz) 300 Kb
  • Biological Unit Coordinates (4tyv.pdb2.gz) 303 Kb
  • LPC: Ligand-Protein Contacts for 4TYV
  • CSU: Contacts of Structural Units for 4TYV
  • Structure Factors (738 Kb)
  • Retrieve 4TYV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TYV from S2C, [Save to disk]
  • View 4TYV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4TYV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4TYV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tyv_B] [4tyv] [4tyv_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4TYV
  • Community annotation for 4TYV at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science