4U45 MAP4K4 in complex with inhibitor (compound 25) date
authors Harris, S.F., Wu, P., Coons, M.
compound source
symmetry
R_factor
R_Free 0.2441
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.58
ligand 3DC, MES, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceFragment-based identification and optimization of a class of potent pyrrolo[2,1-f][1,2,4]triazine MAP4K4 inhibitors., Wang L, Stanley M, Boggs JW, Crawford TD, Bravo BJ, Giannetti AM, Harris SF, Magnuson SR, Nonomiya J, Schmidt S, Wu P, Ye W, Gould SE, Murray LJ, Ndubaku CO, Chen H, Bioorg Med Chem Lett. 2014 Aug 2. pii: S0960-894X(14)00795-1. doi:, 10.1016/j.bmcl.2014.07.071. PMID:25139565
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk]
  • Biological Unit Coordinates (4u45.pdb1.gz) 100 Kb
  • Biological Unit Coordinates (4u45.pdb2.gz) 51 Kb
  • Biological Unit Coordinates (4u45.pdb3.gz) 52 Kb
  • LPC: Ligand-Protein Contacts for 4U45
  • CSU: Contacts of Structural Units for 4U45
  • Structure Factors (520 Kb)
  • Retrieve 4U45 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U45 from S2C, [Save to disk]
  • Re-refined 4u45 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4U45 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4U45
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4U45, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u45_A] [4u45_B] [4u45]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4U45: [S_TKc ] by SMART
  • Other resources with information on 4U45
  • Community annotation for 4U45 at PDBWiki (http://pdbwiki.org)

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