4U67	Crystal structure of the large ribosomal subunit (50S) of Deinococcus radiodurans containing a three residue insertion in L22	date
authors	Wekselman, I., Zimmerman, E., Rozenberg, H., Bashan, A., Yonath, A.
compound		source
symmetry		R_factor R_Free 0.2699
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.65
ligand	MG	enzyme
Gene Ontology	Chain Function Process Component 1 2 3 A B C D E G H I J K L M N O P Q R S T U V W Z
Primary reference	The Ribosomal Protein uL22 Modulates the Shape of the Protein Exit Tunnel., Wekselman I, Zimmerman E, Davidovich C, Belousoff M, Matzov D, Krupkin M, Rozenberg H, Bashan A, Friedlander G, Kjeldgaard J, Ingmer H, Lindahl L, Zengel JM, Yonath A, Structure. 2017 Aug 1;25(8):1233-1241.e3. doi: 10.1016/j.str.2017.06.004. Epub, 2017 Jul 6. PMID:28689968

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3439 Kb) [Save to disk] Biological Unit Coordinates (4u67.pdb1.gz) 3426 Kb LPC: Ligand-Protein Contacts for 4U67 CSU: Contacts of Structural Units for 4U67 Structure Factors (4164 Kb) Retrieve 4U67 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4U67 from S2C, [Save to disk] Re-refined 4u67 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4U67 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4U67

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4u67_X] [4u67_M] [4u67_R] [4u67_A] [4u67_Z] [4u67_C] [4u67_J] [4u67_1] [4u67_P] [4u67_O] [4u67_B] [4u67_L] [4u67_Q] [4u67_D] [4u67_2] [4u67_T] [4u67_H] [4u67_E] [4u67_3] [4u67_Y] [4u67_N] [4u67] [4u67_V] [4u67_G] [4u67_S] [4u67_K] [4u67_W] [4u67_U] [4u67_I] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4U67: [KOW] [Ribosomal_L14] [Ribosomal_L2] [Ribosomal_L2_C ] by SMART

Other resources with information on 4U67

Community annotation for 4U67 at PDBWiki (http://pdbwiki.org)

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